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Available Maps

Interactive Maps [Submit New Map]  

Arabidopsis
Arabidopsis COSII: Arabidopsis thaliana sequenced-based COSII map

Petunia
Petunia exserta X P. parodii: Petunia exserta X P. parodii
Petunia axillaris X P. parodii: Petunia axillaris X P. parodii

Potato
Potato meta-QTL consensus map: Potato meta-QTL consensus map
Potato-TXB 1992: S. tuberosum (2x=24) x S. berthaultii, backcrossed to S. berthaultii, type BC1, 1992


Solanum michoacanum 2011: Solanum michoacanum 2011
Potato 2013: Potato 2013

Eggplant
Eggplant-RAD 2012: Solanum melongena 305E40 x Solanum melongena 67/3
Eggplant-LXM 2002: S. linnaeanum MM195 x S. melongena MM738 type F2, 2002
Eggplant-COSII: S. linnaeanum MM195 x S. melongena MM738

Tobacco
Tobacco Infinium-30k 2015: N.tabacum 30k Infinium HD consensus map 2015
Tobacco SSR 2007: N. tabacum var. Red Russian x N. tabacum var. Hicks Broadleaf
Tobacco N. acuminata: N. acuminata TA3460 × N. acuminata var. multiflora TA3461
Tobacco N. tomentosiformis: N. tomentosiformis TA3385 × N. otophora TA3353

Pepper
Pepper-FA07: Capsicum annuum cv. NuMex RNaky (FA07) x Capsicum frutescens var. BG 2814-6
Pepper-NM06: Capsicum annuum Early Jalapeo x Capsicum annuum CM344 (NM06)
Pepper_Array_Inter01: PepperSNP14K Interspecific Tobasco x P4 type F2
Pepper-FAO3: Capsicum annuum cv. NuMex RNaky x Capsicum frutescens var. BG 2814-6
Pepper-AC99: Capsicum annuum cv. NuMex RNaky x Capsicum chinense var PI159234
Pepper-COSII: Capsicum annuum cv. NuMex RNaky x Capsicum frutescens var. BG 2814-6
Pepper Capsicum: Capsicum annuum A44750157 x Capsicum chinense PI 152225

Tomato
Kazusa F2-2000 genetic map: Kazusa F2-2000 genetic map
Tomato - Kazusa and SolCAP markers mapped to genome: Tomato - Kazusa and SolCAP markers mapped to genome
Tomato-EXPIMP 2009: Tomato-EXPIMP 2009: S. lycopersicum (NCEBR-1) x S. pimpinellifolium (LA2093) type RIL-F7, 2009
Tomato QTL map: Tomato QTL map
TraitGenetics EXPEN2000: TraitGenetics EXPEN2000
TraitGenetics EXPEN2012: TraitGenetics EXPEN2012
TraitGenetics EXPIMP2012: TraitGenetics EXPIMP2012
ITAG 2.3 annotation: ITAG 2.3 annotation
Tomato-EXPIMP 2018 sequence: S. lycopersicum (NCEBR-1) x S. pimpinellifolium (LA2093) type RIL-F8, GBS-SNPs sequence map
Tomato-EXPIMP 2018 genetic: S. lycopersicum (NCEBR-1) x S. pimpinellifolium (LA2093) type RIL-F8, GBS-SNPs genetic map
Tomato FISH map: Solanum lycopersicum (Tomato) Fluorescence In-Situ Hybridization (FISH) Map
Tomato-EXPIMP 2001: S. lycopersicum TA209 x S. pimpinellifolium LA1589 type RI, 2001
Tomato-EXPEN 1992: S. lycopersicum cv. VF36 x S. pennellii LA716 type F2, 1992
Tomato-EXHIR 1997: S. lycopersicum TA209 x S. habrochaites LA1777 type BC1, 1997
Tomato-EXPEN 2000: S. lycopersicum LA925 x S. pennellii LA716 type F2.2000
Tomato-EXPIMP 2008: S. lycopersicum TA492 x S. pimpinellifolium LA1589
Tomato-LXCHM 2007: S. lycopsersicum LE777 x S. chmielewskii CH6047 type F2
Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589: Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589
Yellow Stuffer x LA1589: S.lycopersicum Yellow Stuffer X S.pimpinellifolium LA1589
Sun1642 x LA1589: S.lycopersicum Sun1642 X S.pimpinellifolium LA1589
Tomato AGP map: Tomato (Solanum lycopersicum) Accessioned Golden Path map
Tomato IL map: Solanum lycopersicum Zamir Introgression Lines (IL) based on ExPEN2000
Tomato IL map: Solanum lycopersicum Zamir Introgression Lines (IL) based on ExPEN2000
Tomato Physical map: Solanum lycopersicum Physical Map
Tomato Pachytene Chromosomes: Tomato Pachytene Chromosomes

Comparative Maps  

Interactive comparative map viewer: View two chromosomes from two different maps at the same time; it displays the relationships between the chromosomes and additional information such as associated physical map, inbred lines, and rulers.

Examples: Compare entire maps: To get a better view how two (or three) maps relate to each other, take a zoomed out view of the entire map. A maximum of 3 maps can be shown together at one time. The maps to be displayed can be selected on the top of the display.

Examples:
For more on the comparative map viewer, read the help page.
Static Maps  

Tomato maps
L. esculentum x L. pennellii maps:
Tomato - Arabidopsis synteny map
Pepper SNU2 map
Isogenic Line (IL) map
Lycopersicon pimpinellifolium Inbred Backcross Lines (IBLs)