Tomato AGP map
Tomato (Solanum lycopersicum) Accessioned Golden Path map
Abstract |
The AGP map shows the sequencing progress of the international tomato genome sequencing project by listing all finished clones by estimated physical map position . Each sequencing center generates one or more AGP (Accessioned Golden Path) files and uploads them to SGN. These files contain all the sequenced BACs, their position on the chromosome, the overlaps with other BACs and other information. For a complete specification, please refer to the Sanger AGP specification. The AGP files can also be downloaded from the SGN FTP site, at ftp://ftp.sgn.cornell.edu/tomato_genome/agp/.
Note that this map is in testing (beta), and not all features may be functional.
Parents of Mapping Population |
Map Statistics |
Overview
SL2.40ch00
SL2.40ch01
SL2.40ch02
SL2.40ch03
SL2.40ch04
SL2.40ch05
SL2.40ch06
SL2.40ch07
SL2.40ch08
SL2.40ch09
SL2.40ch10
SL2.40ch11
SL2.40ch12 chromosome_names
32.987597
90.304244
49.918294
64.840714
64.064312
65.021438
46.041636
65.268621
63.032657
67.662091
64.834305
53.386025
65.486253 chromosome_lengths