Sol Genomics Network

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Sol Genomics Network

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Maps
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- Tomato
- Tomato-EXPEN 2000
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- Pepper
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- Eggplant COSII map
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- Potato-TXB 1992
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Genomes
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- Tomato
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- Solanum pennellii
- Solanum lycopersicoides
- Solanum pimpinellifolium
- Solanum lycopersicum var. cerasiforme
- Iochroma cyaneum
- Draft Genomes
- Nicotiana attenuata
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- Nicotiana tabacum
- Petunia axillaris
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- Solanum chilense
- Coffea humblotiana
- Resequencing projects
- Solanum lycopersicum inbreds
- 150 Tomato Genome Resequencing Project
- BGI Tomato 360 genomes
- Varitome Project
Projects
- Projects
- Tomato graph pangenome project
- Varitome project
- Nicotiana benthamiana BTI site
- 100 Tomato genomes project
- Tomato Immune Response Resequencing
- Previous Projects
- Solanaceae project (SOL)
- SOL-100 Project
- International Tomato Sequencing Project
- U.S. tomato sequencing project
Tools
- Sequence Analysis
- BLAST
- VIGS Tool
- Alignment Analyzer
- Tree Browser
- Motif Finder
- Mapping
- Genome Browser (Jbrowse)
- Comparative Map Viewer
- CAPS Designer
- solQTL: QTL Mapping
- Molecular Biology
- In Silico PCR
- Tomato Expression Atlas (TEA)
- Tomato Expression Database (TED)
- Systems Biology
- SolCyc Biochemical Pathways
- Coffee Interactomic Data
- SGN Ontology Browser
- Breeder Tools
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- Bulk Query
- FTP Site
- Download Genome Sequences
- Download Gene Sequences
- Clones, Arrays, Unigenes and BACs
- Unigene Converter
About
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Notice: Due to a server crash, the database was briefly unavailable yesterday. Please let us know if anything does not work as expected. Apologies for any inconviences.

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Genome: Solanum lycopersicum var. cerasiforme

Solanum lycopersicum var. cerasiforme is a sub species of domesticated tomato Solanum lycopersicum.

S. lycopersicum var. cerasiforme LA1673 denovo genome

Hitomi Takei, Kenta Shirasawa, Kosuke Kuwabara, Atsushi Toyoda, Yuma Matsuzawa, Shinji Iioka, Tohru Ariizumi, De novo genome assembly of two tomato ancestors, solanum pimpinellifolium and S. lycopersicum var. cerasiforme, by long-read sequencing, DNA Research, 2021;, dsaa029, https://doi.org/10.1093/dnares/dsaa029

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LA1673 genome contigs

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Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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