Sol Genomics Network

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Sol Genomics Network

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- Organisms
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Maps
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- Tomato
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- Pepper
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- Eggplant
- Eggplant COSII map
- Eggplant-LXM 2002
- More Maps
- Potato-TXB 1992
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Genomes
- Sequenced Accessions
- Completed Genomes
- Tomato
- Potato
- Pepper
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- Solanum pennellii
- Solanum lycopersicoides
- Solanum pimpinellifolium
- Solanum lycopersicum var. cerasiforme
- Iochroma cyaneum
- Draft Genomes
- Nicotiana attenuata
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- Nicotiana tabacum
- Petunia axillaris
- Petunia inflata
- Solanum chilense
- Coffea humblotiana
- Resequencing projects
- Solanum lycopersicum inbreds
- 150 Tomato Genome Resequencing Project
- BGI Tomato 360 genomes
- Varitome Project
Projects
- Projects
- Tomato graph pangenome project
- Varitome project
- Nicotiana benthamiana BTI site
- 100 Tomato genomes project
- Tomato Immune Response Resequencing
- Previous Projects
- Solanaceae project (SOL)
- SOL-100 Project
- International Tomato Sequencing Project
- U.S. tomato sequencing project
Tools
- Sequence Analysis
- BLAST
- VIGS Tool
- Alignment Analyzer
- Tree Browser
- Motif Finder
- Mapping
- Genome Browser (Jbrowse)
- Comparative Map Viewer
- CAPS Designer
- solQTL: QTL Mapping
- Molecular Biology
- In Silico PCR
- Tomato Expression Atlas (TEA)
- Tomato Expression Database (TED)
- Systems Biology
- SolCyc Biochemical Pathways
- Coffee Interactomic Data
- SGN Ontology Browser
- Breeder Tools
- Breeders Toolbox
- Bulk Query
- FTP Site
- Download Genome Sequences
- Download Gene Sequences
- Clones, Arrays, Unigenes and BACs
- Unigene Converter
About
- About
- Contact
- Cite SGN
- Links
- Help
- FAQ
- Become SGN Editor
- Forum
- FTP data
- SlideShare
- Twitter
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Notice: Due to a server crash, the database was briefly unavailable yesterday. Please let us know if anything does not work as expected. Apologies for any inconviences.

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Nicotiana attenuata genome release v2 annotation v5

The genome assembly and genome annotation are deposited in NCBI under bioproject PRJNA316810. Expression profile of predicted genes can be accessed via Nicotiana attenuata data hub: http://nadh.ice.mpg.de/NaDH/

Further detailed description on the process of genome assembly and annotation can be found in this reference:

Xu S, Brockmöller T, Navarro-Quezada A, Kuhl H, Gase K, Ling Z, Zhou W, Kreitzer C, Stanke M, Tang H, et al.
Wild tobacco genomes reveal the evolution of prolific nicotine production.
Proceedings of the National Academy of Sciences USA. In press.

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Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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